nf-core/homer/makeucscfile @ 0.0.0-6c4ed3a
Summary
Create a UCSC bed graph with the HOMER suite
Get started
Add the following snippet to your workflow script to include this module.
include { HOMER_MAKEUCSCFILE } from 'nf-core/homer/makeucscfile'
License
MIT License
Process
Name
|
HOMER_MAKEUCSCFILE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
tagDir
directory
|
The 'Tag Directory' tagDir
|
Output
2 channels
#1
bedGraph
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.bedGraph.gz
file
|
The UCSC bed graph *.bedGraph.gz
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| homer | HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis. | n/a |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:24:34 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fhomer%2Fmakeucscfile/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/homer/makeucscfile/blobs/sha256:779197655efb3d7d9b94117b8c1f365261e05029831a2fe833ad37b646ada2aa |
| Size | 2.7 KB |
| Checksum | sha256:779197655efb3d7d9b94117b8c1f365261e05029831a2fe833ad37b646ada2aa |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:24:34 (UTC) | 3 | 2.7 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:09:59 (UTC) | 4 | 2.7 KB |