nf-core/krakenuniq/download @ 0.0.0-70ea099
Summary
Download KrakenUniq databases and related fles
Get started
Add the following snippet to your workflow script to include this module.
include { KRAKENUNIQ_DOWNLOAD } from 'nf-core/krakenuniq/download'
License
MIT License
Process
Name
|
KRAKENUNIQ_DOWNLOAD |
|---|
Input
1 channel
pattern
string
|
Pattern indicating what type of NCBI data to download. See KrakenUniq documnation for possibilities. |
|---|
Output
2 channels
#1
output
${pattern}/
directory
|
Directory containing downloaded data with directory naming being the user provided pattern. |
|---|
#2
versions_krakenuniq
tuple
${task.process}
string
|
The name of the process |
|---|---|
krakenuniq
string
|
The name of the tool |
krakenuniq --version | sed '1!d;s/KrakenUniq version //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| krakenuniq | Metagenomics classifier with unique k-mer counting for more specific results | https://github.com/fbreitwieser/krakenuniq |
| Version | 0.0.0-70ea099 |
|---|---|
| Commit ID | c4ed7fdd281d290c622c5d93fa173effc0217fdb |
| Release Date | 26 Apr 2026 15:00:09 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fkrakenuniq%2Fdownload/0.0.0-70ea099/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/krakenuniq/download/blobs/sha256:5cd07d73b0f1052c471a31382c893f5fe9a5931e85f636c4c17a92373015a86c |
| Size | 2.3 KB |
| Checksum | sha256:5cd07d73b0f1052c471a31382c893f5fe9a5931e85f636c4c17a92373015a86c |
| Downloads | 0 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-c4ed7fd | 27 Apr 2026 15:00:21 (UTC) | 0 | 2.3 KB | |
| 0.0.0-70ea099 | 26 Apr 2026 15:00:09 (UTC) | 0 | 2.3 KB | |
| 0.0.0-6c4ed3a | 23 Apr 2026 15:27:20 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:19:05 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:13:25 (UTC) | 3 | 2.2 KB |