nf-core/last/lastdb @ 0.0.0-6c4ed3a
Summary
Prepare sequences for subsequent alignment with lastal.
Get started
Add the following snippet to your workflow script to include this module.
include { LAST_LASTDB } from 'nf-core/last/lastdb'
License
MIT License
Process
Name
|
LAST_LASTDB |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fastx
file
|
Sequence file in FASTA or FASTQ format. May be compressed with gzip. *.{fasta,fasta.gz,fastq,fastq.gz}
|
Output
2 channels
#1
index
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
lastdb
directory
|
directory containing the files of the LAST index lastdb/
|
#2
versions_last
tuple
${task.process}
string
|
The name of the process |
|---|---|
last
string
|
The name of the tool |
lastal --version | sed 's/lastal //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| last | LAST finds & aligns related regions of sequences. | https://gitlab.com/mcfrith/last |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:27:31 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Flast%2Flastdb/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/last/lastdb/blobs/sha256:5024b8d8fe962343df29c9985b1c8e0de6aef1e88a6770a79a0a1c519f38186e |
| Size | 2.9 KB |
| Checksum | sha256:5024b8d8fe962343df29c9985b1c8e0de6aef1e88a6770a79a0a1c519f38186e |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:27:31 (UTC) | 2 | 2.9 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:13:43 (UTC) | 3 | 2.9 KB |