Nextflow Modules
Showing module(s) with keyword "LAST"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/last/dotplot | Process | LAST plot pair alignment MAF | Makes a dotplot (Oxford Grid) of pair-wise sequence alignments |
| nf-core/last/lastal | Process | LAST align fastq fasta | Aligns query sequences to target sequences indexed with lastdb |
| nf-core/last/lastdb | Process | LAST index fasta fastq | Prepare sequences for subsequent alignment with lastal. |
| nf-core/last/mafconvert | Process | LAST convert alignment MAF | Converts MAF alignments in another format. |
| nf-core/last/mafswap | Process | LAST reorder alignment MAF | Reorder alignments in a MAF file |
| nf-core/last/postmask | Process | LAST mask alignment MAF | Post-alignment masking |
| nf-core/last/split | Process | LAST split spliced alignment MAF | Find split or spliced alignments in a MAF file |
| nf-core/last/train | Process | LAST train fastq fasta | Find suitable score parameters for sequence alignment |