nf-core/mash/dist @ 0.0.0-0c7146d
Summary
Calculate Mash distances between reference and query sequences
Get started
Add the following snippet to your workflow script to include this module.
include { MASH_DIST } from 'nf-core/mash/dist'
License
MIT License
Process
Name
|
MASH_DIST |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
query
file
|
FASTA, FASTQ or Mash sketch *.{fasta,fasta.gz,fastq,fastq.gz,msh}
|
reference
file
|
FASTA, FASTQ or Mash sketch *.{fasta,fasta.gz,fastq,fastq.gz,msh}
|
|---|
Output
2 channels
#1
dist
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.txt
file
|
The results from mash dist *.txt
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| mash | Fast sequence distance estimator that uses MinHash | https://github.com/marbl/Mash |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:16:14 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmash%2Fdist/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/mash/dist/blobs/sha256:4de87fc0b07eeabb24c1dce86872cdf3832d867bf385fb2f5c830e2506031bbc |
| Size | 2.3 KB |
| Checksum | sha256:4de87fc0b07eeabb24c1dce86872cdf3832d867bf385fb2f5c830e2506031bbc |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:29:31 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:20:58 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:16:14 (UTC) | 4 | 2.3 KB |