nf-core/metaphlan3/mergemetaphlantables @ 0.0.0-6c4ed3a
Summary
Merges output abundance tables from MetaPhlAn3
Get started
Add the following snippet to your workflow script to include this module.
include { METAPHLAN3_MERGEMETAPHLANTABLES } from 'nf-core/metaphlan3/mergemetaphlantables'
License
MIT License
Process
Name
|
METAPHLAN3_MERGEMETAPHLANTABLES |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
profiles
file
|
List of per-sample MetaPhlAn3 taxonomic abundance tables *
|
Output
2 channels
#1
txt
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
${prefix}.txt
file
|
Combined MetaPhlAn3 table *.txt
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| metaphlan3 | Identify clades (phyla to species) present in the metagenome obtained from a microbiome sample and their relative abundance | https://huttenhower.sph.harvard.edu/metaphlan/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:30:21 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmetaphlan3%2Fmergemetaphlantables/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/metaphlan3/mergemetaphlantables/blobs/sha256:4932ef181d3945e81102f330bbb4a120c88e60f4d5537038c94990b73be9262c |
| Size | 2.8 KB |
| Checksum | sha256:4932ef181d3945e81102f330bbb4a120c88e60f4d5537038c94990b73be9262c |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:30:21 (UTC) | 3 | 2.8 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:21:41 (UTC) | 3 | 2.8 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:17:35 (UTC) | 4 | 2.8 KB |