Nextflow Registry | nf-core/mmseqs/makepaddedseqdb@0.0.0-6c4ed3a

nf-core/mmseqs/makepaddedseqdb @ 0.0.0-6c4ed3a

Create an MMseqs padded database from an existing MMseqs database

Latest version: 0.0.0-6c4ed3a

Total downloads: 8

Source: nf-core/modules

Authors: @nbtm-sh

Maintainers: @nbtm-sh

Create an MMseqs padded database from an existing MMseqs database

Add the following snippet to your workflow script to include this module.

include { MMSEQS_MAKEPADDEDSEQDB } from 'nf-core/mmseqs/makepaddedseqdb'

MIT License

Process

`Name`	`MMSEQS_MAKEPADDEDSEQDB`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`db_in` directory	Input of existing MMseqs database

Output 2 channels

#1 db_padded tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`${prefix}/` directory	The padded MMseqs2 database

#2 versions_mmseqs tuple

`${task.process}` string	The name of the process
`mmseqs` string	The name of the tool
`mmseqs version` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
mmseqs	MMseqs2: ultra fast and sensitive sequence search and clustering suite	https://github.com/soedinglab/MMseqs2

Version	0.0.0-6c4ed3a
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	23 Apr 2026 15:31:57 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Fmmseqs%2Fmakepaddedseqdb/0.0.0-6c4ed3a/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/mmseqs/makepaddedseqdb/blobs/sha256:a00bb378c37663eb386096704a23a10e6fd7cdc0cb2d515c66421a8369732588
Size	2.7 KB
Checksum	sha256:a00bb378c37663eb386096704a23a10e6fd7cdc0cb2d515c66421a8369732588
Downloads	4

Version	Date	Status	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:31:57 (UTC)		4	2.7 KB
0.0.0-0c7146d	08 Apr 2026 19:18:48 (UTC)		4	2.7 KB