Nextflow Registry | nf-core/openms/idmassaccuracy@0.0.0-0c7146d

nf-core/openms/idmassaccuracy @ 0.0.0-0c7146d

Calculates a distribution of the mass error from given mass spectra and IDs.

mass_error openms proteomics

Latest version: 0.0.0-6c4ed3a

Total downloads: 9

Source: nf-core/modules

Authors: @jonasscheid

Calculates a distribution of the mass error from given mass spectra and IDs.

Add the following snippet to your workflow script to include this module.

include { OPENMS_IDMASSACCURACY } from 'nf-core/openms/idmassaccuracy'

MIT License

Process

`Name`	`OPENMS_IDMASSACCURACY`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`mzmls` file	List containing one or more mzML files e.g. `[ 'file1.mzML', 'file2.mzML' ]` `*.{mzML}`
`idxmls` file	List containing one or more idXML files e.g. `[ 'file1.idXML', 'file2.idXML' ]` `*.{idXML}`

Output 3 channels

#1 frag_err tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`*frag_mass_err.tsv` file	TSV file containing the fragment mass errors `*frag_mass_err.{tsv}`

#2 prec_err tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test' ]`
`*prec_mass_err.tsv` file	Optional TSV file containing the precursor mass errors `*prec_mass_err.{tsv}`

#3 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
openms	OpenMS is an open-source software C++ library for LC-MS data management and analyses	https://openms.de

Version	0.0.0-0c7146d
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	08 Apr 2026 19:22:12 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Fopenms%2Fidmassaccuracy/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/openms/idmassaccuracy/blobs/sha256:002d48a820fd63cba3be387c42eaa0e9f96e99d2c0d2d41cd67e93bbac822b79
Size	3.1 KB
Checksum	sha256:002d48a820fd63cba3be387c42eaa0e9f96e99d2c0d2d41cd67e93bbac822b79
Downloads	3

Version	Date	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:33:41 (UTC)	3	3.1 KB
0.0.0-3fc6d40	22 Apr 2026 15:24:04 (UTC)	3	3.1 KB
0.0.0-0c7146d	08 Apr 2026 19:22:12 (UTC)	3	3.1 KB