nf-core/qcat @ 0.0.0-3fc6d40
Summary
Demultiplexer for Nanopore samples
Get started
Add the following snippet to your workflow script to include this module.
include { QCAT } from 'nf-core/qcat'
License
MIT License
Process
Name
|
QCAT |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
reads
file
|
Non-demultiplexed fastq files |
barcode_kit
string
|
Barcode kit used for demultiplexing |
|---|
Output
2 channels
#1
reads
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq/*.fastq.gz
file
|
Demultiplexed fastq samples *.fastq.gz
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| qcat | A demultiplexer for Nanopore samples | https://github.com/nanoporetech/qcat |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:28:05 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fqcat/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/qcat/blobs/sha256:2b3d657983ccc237e50609776e9c1afae60eb58e3b9b1b16e49c4c6ce61f1890 |
| Size | 2.4 KB |
| Checksum | sha256:2b3d657983ccc237e50609776e9c1afae60eb58e3b9b1b16e49c4c6ce61f1890 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:39:14 (UTC) | 3 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:28:05 (UTC) | 3 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:29:40 (UTC) | 2 | 2.4 KB |