nf-core/rastair/methylkit @ 0.0.0-6c4ed3a
Summary
Parses rastair call output and converts it into a MethylKit-compatible format.
Get started
Add the following snippet to your workflow script to include this module.
include { RASTAIR_METHYLKIT } from 'nf-core/rastair/methylkit'
License
MIT License
Process
Name
|
RASTAIR_METHYLKIT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
rastair_call_txt
file
|
Text file from *.rastair_call.txt
|
Output
2 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
methylkit
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*methylkit.txt.gz
file
|
Gzipped text file in MethylKit format. *methylkit.txt.gz
|
| Tool | Description | Homepage |
|---|---|---|
| rastair | A tool for rapid genome-wide assessment of C->T conversion as a readout for methylation. The module uses a script bundled with Rastair to convert formats. | https://bitbucket.org/bsblabludwig/rastair/src/master/ |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:40:28 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Frastair%2Fmethylkit/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/rastair/methylkit/blobs/sha256:17e5867c668bb05092207131383051044225c35ada35a4637b452ce69e4ba4d2 |
| Size | 2.4 KB |
| Checksum | sha256:17e5867c668bb05092207131383051044225c35ada35a4637b452ce69e4ba4d2 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:40:28 (UTC) | 3 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:30:17 (UTC) | 3 | 2.4 KB |