Nextflow Modules
Showing module(s) with keyword "mCtoT"
| Module | Keywords | Description |
|---|---|---|
| nf-core/rastair/call | methylation rastair C->T conversion bisulphite bisulfite bam mCtoT | Assess positive C->T conversion as a readout for methylation on a genome-wide basis |
| nf-core/rastair/mbias | methylation rastair C->T conversion bisulphite bisulfite bam mCtoT mbias methylation bias | Assess C->T conversion as a readout for methylation on a per-read-position basis. |
| nf-core/rastair/mbiasparser | methylation rastair C->T conversion bisulphite bisulfite bam mCtoT mbias methylation bias mbiasparser cutoff | Parses Rastair mbias output to assess the ideal cutoff for read trimming and reports the values. |
| nf-core/rastair/methylkit | methylation rastair C->T conversion bisulphite bisulfite mCtoT methylkit convert parser | Parses rastair call output and converts it into a MethylKit-compatible format. |