nf-core/repeatmodeler/builddatabase @ 0.0.0-3fc6d40
Summary
Create a database for RepeatModeler
Get started
Add the following snippet to your workflow script to include this module.
include { REPEATMODELER_BUILDDATABASE } from 'nf-core/repeatmodeler/builddatabase'
License
MIT License
Process
Name
|
REPEATMODELER_BUILDDATABASE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fasta
file
|
Fasta file *.{fasta,fsa,fa}
|
Output
2 channels
#1
db
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
${prefix}.*
file
|
Database files for repeatmodeler `${prefix}.*`
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| repeatmodeler | RepeatModeler is a de-novo repeat family identification and modeling package. | https://github.com/Dfam-consortium/RepeatModeler |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:28:52 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Frepeatmodeler%2Fbuilddatabase/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/repeatmodeler/builddatabase/blobs/sha256:0e6f1fd5b7a6a3b95fc9fbe04c2d560fcf4d1f11b366cac9be9700d773d6bdeb |
| Size | 2.5 KB |
| Checksum | sha256:0e6f1fd5b7a6a3b95fc9fbe04c2d560fcf4d1f11b366cac9be9700d773d6bdeb |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:40:40 (UTC) | 3 | 2.5 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:28:52 (UTC) | 3 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:30:35 (UTC) | 5 | 2.5 KB |