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nf-core/ripgrep @ 0.0.0-0c7146d

ripgrep recursively searches directories for a regex pattern

Latest version: 0.0.0-6c4ed3a
Total downloads: 7
Source: nf-core/modules
Authors: @itrujnara
Maintainers: @itrujnara

Summary

ripgrep recursively searches directories for a regex pattern

Get started

Add the following snippet to your workflow script to include this module.

include { RIPGREP } from 'nf-core/ripgrep'

License

MIT License

Process
Name RIPGREP
Input 3 channels
#1 tuple
meta map

Groovy Map containing sample information e.g. [ id:'sample1' ]

files file

File(s) to be searched

pattern string

Regex pattern to search for

compress boolean

Compress the output file using pigz

Output 2 channels
#1 txt tuple
meta map

Groovy map containing sample information

*.txt{.gz,} file

Output file containing the search results

*.txt{.gz,}
#2 versions
versions.yml file

File containing software versions

versions.yml
Tool Description Homepage
ripgrep ripgrep recursively searches directories for a regex pattern https://github.com/BurntSushi/ripgrep
pigz Parallel implementation of the gzip algorithm. https://zlib.net/pigz/
Version 0.0.0-0c7146d
Commit ID 6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date 08 Apr 2026 19:31:51 (UTC)
Download URL https://registry.nextflow.io/api/v1/modules/nf-core%2Fripgrep/0.0.0-0c7146d/download
OCI Store URL https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/ripgrep/blobs/sha256:1c5de4b1c96e6055c407d6adf569cc776ae9c1ffbc5d34e64f68876395064e1b
Size 2.6 KB
Checksum sha256:1c5de4b1c96e6055c407d6adf569cc776ae9c1ffbc5d34e64f68876395064e1b
Downloads 3
Version Date Status Downloads Size
0.0.0-6c4ed3a 23 Apr 2026 15:41:03 (UTC) 4 2.6 KB
0.0.0-0c7146d 08 Apr 2026 19:31:51 (UTC) 3 2.6 KB