nf-core/samplesheetparser/info @ 0.0.0-4b801f9
Summary
Display a structured JSON summary of an Illumina SampleSheet.csv (V1 or V2) including format version, sample count, lanes, index type, read lengths, adapter sequences, experiment name, and instrument platform. Useful for logging run metadata or conditional branching in pipelines.
Get started
Add the following snippet to your workflow script to include this module.
include { SAMPLESHEETPARSER_INFO } from 'nf-core/samplesheetparser/info'
License
MIT License
Name
|
SAMPLESHEETPARSER_INFO |
|---|
meta
map
|
Groovy Map containing sample information. Use [ id:'run_id' ] to identify the sheet. |
|---|---|
samplesheet
file
|
Illumina SampleSheet.csv (V1 or V2 format, auto-detected) *.{csv,CSV}
|
json
tuple
meta
map
|
Groovy Map containing sample information |
|---|---|
*.info.json
file
|
JSON summary with file, format, sample_count, lanes, index_type, read_lengths, adapters, experiment_name, and instrument fields. *.info.json
|
versions_samplesheetparser
tuple
${task.process}
string
|
The name of the process |
|---|---|
samplesheet-parser
string
|
The name of the tool |
samplesheet --version | sed 's/samplesheet-parser //'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| samplesheet-parser | Format-agnostic parser for Illumina SampleSheet.csv files. Supports IEM V1 (bcl2fastq) and BCLConvert V2 with auto-detection, bidirectional conversion, index validation, and Hamming distance checking. | https://github.com/chaitanyakasaraneni/samplesheet-parser |
| Version | 0.0.0-4b801f9 |
|---|---|
| Commit ID | 4b801f99cf081cfbc00d202272385817636e6dfd |
| Release Date | 15 May 2026 15:00:18 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fsamplesheetparser%2Finfo/0.0.0-4b801f9/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/samplesheetparser/info/blobs/sha256:39535c27f5f1ef13c8d68776d8b2b610d4e52c59d9727f8899ba9f17c825ece1 |
| Size | 2.5 KB |
| Checksum | sha256:39535c27f5f1ef13c8d68776d8b2b610d4e52c59d9727f8899ba9f17c825ece1 |
| Downloads | 0 |
| Version | Date | Status | Downloads | Size | Diff |
|---|---|---|---|---|---|
| 0.0.0-4b801f9 | 15 May 2026 15:00:18 (UTC) | 0 | 2.5 KB | - |