nf-core/slimfastq @ 0.0.0-3fc6d40
Summary
Fast, efficient, lossless compression of FASTQ files.
Get started
Add the following snippet to your workflow script to include this module.
include { SLIMFASTQ } from 'nf-core/slimfastq'
License
MIT License
Process
Name
|
SLIMFASTQ |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq
file
|
Either a single-end FASTQ file or paired-end files. *.{fq.gz,fastq.gz}
|
Output
2 channels
#1
sfq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.sfq
file
|
Either one or two sequence files in slimfastq compressed format. *.{sfq}
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| slimfastq | slimfastq efficiently compresses/decompresses FASTQ files | https://github.com/Infinidat/slimfastq |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:32:07 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fslimfastq/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/slimfastq/blobs/sha256:1ecf480c418fb4bebc69b571aa0279a73df6a9380dfe82528017906db5fad0d5 |
| Size | 2.5 KB |
| Checksum | sha256:1ecf480c418fb4bebc69b571aa0279a73df6a9380dfe82528017906db5fad0d5 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:46:27 (UTC) | 4 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:32:07 (UTC) | 3 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:39:05 (UTC) | 3 | 2.4 KB |