nf-core/spring/compress @ 0.0.0-0c7146d
Summary
Fast, efficient, lossless compression of FASTQ files.
Get started
Add the following snippet to your workflow script to include this module.
include { SPRING_COMPRESS } from 'nf-core/spring/compress'
License
MIT License
Process
Name
|
SPRING_COMPRESS |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
fastq1
file
|
FASTQ file to compress. *.{fq.gz,fastq.gz}
|
fastq2
file
|
Parired FASTQ file fon non single-end experiments. *.{fq.gz,fastq.gz}
|
Output
2 channels
#1
spring
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.spring
file
|
One sequence file in spring compressed format. *.{spring}
|
#2
versions_spring
tuple
${task.process}
string
|
The name of the process |
|---|---|
spring
string
|
The name of the tool |
1.1.1
string
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| spring | SPRING is a compression tool for Fastq files (containing up to 4.29 Billion reads) | https://github.com/shubhamchandak94/Spring |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:40:14 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fspring%2Fcompress/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/spring/compress/blobs/sha256:0423846ff4ea8296141cce4b0c564d8c16d7705b04c4fa6a2da125e67185eeb9 |
| Size | 2.5 KB |
| Checksum | sha256:0423846ff4ea8296141cce4b0c564d8c16d7705b04c4fa6a2da125e67185eeb9 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:47:09 (UTC) | 3 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:40:14 (UTC) | 2 | 2.5 KB |