nf-core/svdb/build @ 0.0.0-6c4ed3a
Summary
Build a structural variant database
Get started
Add the following snippet to your workflow script to include this module.
include { SVDB_BUILD } from 'nf-core/svdb/build'
License
MIT License
Process
Name
|
SVDB_BUILD |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
input
file
|
Input VCF file(s) or folder *
|
input_type
string
|
input type |
|---|
Output
2 channels
#1
db
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
*.db
file
|
SVDB database |
#2
versions_svdb
tuple
${task.process}
string
|
The name of the process |
|---|---|
svdb
string
|
The name of the tool |
svdb | sed -nE 's/.*SVDB-([0-9.]+).*/\1/p'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| svdb | structural variant database software | https://github.com/J35P312/SVDB |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:48:46 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fsvdb%2Fbuild/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/svdb/build/blobs/sha256:ed4d2dabfa6019835ae2865da10a23942aa5c6e1be23bb8effd07cad643c2b77 |
| Size | 2.4 KB |
| Checksum | sha256:ed4d2dabfa6019835ae2865da10a23942aa5c6e1be23bb8effd07cad643c2b77 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:48:46 (UTC) | 4 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:41:27 (UTC) | 2 | 2.4 KB |