nf-core/sylphtax/merge @ 0.0.0-3fc6d40
Summary
Merge multiple taxonomic profiles from sylphtaxt/taxprof into a tsv table
Get started
Add the following snippet to your workflow script to include this module.
include { SYLPHTAX_MERGE } from 'nf-core/sylphtax/merge'
License
MIT License
Process
Name
|
SYLPHTAX_MERGE |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
sylphtax_reports
file
|
Output taxonomic profile from sylph-tax taxprof command. *.{sylphmpa}
|
data_type
string
|
Can be ANI, relative abundance, or sequence abundance. |
|---|
Output
2 channels
#1
tsv
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.tsv
file
|
Output profile with the merged taxonomic profiles in tsv format. *.tsv
|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| sylphtax | Integrating taxonomic information into the sylph metagenome profiler. | https://github.com/bluenote-1577/sylph-tax?tab=readme-ov-file |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:34:05 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fsylphtax%2Fmerge/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/sylphtax/merge/blobs/sha256:42d069c6971e1b9bd9d5aeab17f66d5e417cee922752f108e4f841e3b99225fa |
| Size | 2.5 KB |
| Checksum | sha256:42d069c6971e1b9bd9d5aeab17f66d5e417cee922752f108e4f841e3b99225fa |
| Downloads | 5 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:49:06 (UTC) | 4 | 2.5 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:34:05 (UTC) | 5 | 2.5 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:42:38 (UTC) | 3 | 2.5 KB |