nf-core/truvari/segment @ 0.0.0-6c4ed3a
Summary
Normalization of SVs into disjointed genomic regions
Get started
Add the following snippet to your workflow script to include this module.
include { TRUVARI_SEGMENT } from 'nf-core/truvari/segment'
License
MIT License
Process
Name
|
TRUVARI_SEGMENT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
vcf
file
|
Input VCF file *.{vcf,gz}
|
Output
2 channels
#1
vcf
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.vcf
file
|
Segmented VCF file *.{vcf}
|
#2
versions_truvari
tuple
${task.process}
string
|
The process the versions were collected from |
|---|---|
truvari
string
|
The name of the tool |
truvari version | sed 's/Truvari v//'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| truvari | Structural variant comparison tool for VCFs | https://github.com/ACEnglish/truvari |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:50:18 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Ftruvari%2Fsegment/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/truvari/segment/blobs/sha256:c47b39a6acda53faf9c4d39b2b218c6f4f7f190e68cb5c2ee7397a4b8d3d3cec |
| Size | 2.3 KB |
| Checksum | sha256:c47b39a6acda53faf9c4d39b2b218c6f4f7f190e68cb5c2ee7397a4b8d3d3cec |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:50:18 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:34:55 (UTC) | 1 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:44:24 (UTC) | 3 | 2.3 KB |