Nextflow Modules
Showing module(s) with keyword "normalization"
| Module | Keywords | Description |
|---|---|---|
| nf-core/argnorm | amr antimicrobial resistance arg antimicrobial resistance genes genomics metagenomics normalization drug categorization | Normalize antibiotic resistance genes (ARGs) using the ARO ontology (developed by CARD). |
| nf-core/bbmap/bbnorm | normalization assembly coverage | BBNorm is designed to normalize coverage by down-sampling reads over high-depth areas of a genome, to result in a flat coverage distribution. |
| nf-core/truvari/segment | structural variants sv vcf benchmark normalization | Normalization of SVs into disjointed genomic regions |
| nf-core/variantextractor | vcf variant structural variant normalization homogenization | Deterministic and standard extractor of SNVs, indels and structural variants (SVs) from VCF files. Homogenizes multiallelic variants, MNPs and SVs (including imprecise paired breakends and single breakends) to facilitate downstream processing. |
| nf-core/vt/normalize | normalization vcf snps indels | normalizes variants in a VCF file |