nf-core/ultraplex @ 0.0.0-0c7146d
Summary
Ultraplex is an all-in-one software package for processing and demultiplexing fastq files.
Get started
Add the following snippet to your workflow script to include this module.
include { ULTRAPLEX } from 'nf-core/ultraplex'
License
MIT License
Process
Name
|
ULTRAPLEX |
|---|
Input
2 channels
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
reads
file
|
FASTQ file(s) to demultiplex |
barcode_file
file
|
FASTQ file containing barcode sequences |
|---|
Output
4 channels
#1
fastq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] *[!no_match].fastq.gz
|
|---|---|
*_matched.fastq.gz
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] *[!no_match].fastq.gz
|
#2
report
*.log
file
|
File containing demultiplexing log *.log
|
|---|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#4
no_match_fastq
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] *[!no_match].fastq.gz
|
|---|---|
*_no_match_*.fastq.gz
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] *no_match.fastq.gz
|
| Tool | Description | Homepage |
|---|---|---|
| ultraplex | fastq demultiplexer | https://github.com/ulelab/ultraplex |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:44:51 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fultraplex/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/ultraplex/blobs/sha256:b2fbc0650429a8124f5b0d392871df4ecc15aa279e2b0bea4a9caf2fb74f0605 |
| Size | 3.4 KB |
| Checksum | sha256:b2fbc0650429a8124f5b0d392871df4ecc15aa279e2b0bea4a9caf2fb74f0605 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:50:36 (UTC) | 3 | 3.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:35:12 (UTC) | 2 | 3.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:44:51 (UTC) | 2 | 3.4 KB |