nf-core/yak/count @ 0.0.0-3fc6d40
Summary
a tool to build k-mer hash table for fasta and fastq files
Get started
Add the following snippet to your workflow script to include this module.
include { YAK_COUNT } from 'nf-core/yak/count'
License
MIT License
Process
Name
|
YAK_COUNT |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
fastq
file
|
reads fastq/fasta file *.{fastq.gz,fq.gz,fasta.gz,fa.gz}
|
Output
2 channels
#1
yak
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.yak
file
|
k-mer hash table of input *.{yak}
|
#2
versions_yak
tuple
${task.process}
string
|
The name of the process |
|---|---|
yak
string
|
The name of the tool |
yak version
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| yak | Yet another k-mer analyzer | https://github.com/lh3/yak |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:37:11 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fyak%2Fcount/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/yak/count/blobs/sha256:61c09664fb3eea6c3be8dcf39bef5c69a68ef7e6a18c9174123c4d149dfabaa1 |
| Size | 2.3 KB |
| Checksum | sha256:61c09664fb3eea6c3be8dcf39bef5c69a68ef7e6a18c9174123c4d149dfabaa1 |
| Downloads | 2 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:53:20 (UTC) | 3 | 2.2 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:37:11 (UTC) | 2 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:48:20 (UTC) | 4 | 2.2 KB |