Nextflow Modules
Showing module(s) with keyword "interval_list"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/gatk4/filterintervals | Process | filterintervals gatk4 interval_list | Filters intervals based on annotations and/or count statistics. |
| nf-core/gatk4/intervallisttools | Process | bed gatk4 interval_list sort | Splits the interval list file into unique, equally-sized interval files and place it under a directory |
| nf-core/gatk4/samtofastq | Process | bed gatk4 interval_list | Converts BAM/SAM file to FastQ format |
| nf-core/picard/scatterintervalsbyns | Process | interval_list scatter regions | Writes an interval list created by splitting a reference at Ns.A Program for breaking up a reference into intervals of alternating regions of N and ACGT bases |