Nextflow Modules
Showing module(s) with keyword "intervals"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/bedtools/complement | Process | bed gff vcf complement bedtools intervals | Returns all intervals in a genome that are not covered by at least one interval in the input BED/GFF/VCF file. |
| nf-core/bedtools/nuc | Process | bed nucBed bedtools GC content AT content nucleotide content intervals | Profiles the nucleotide content of intervals in a fasta file. |
| nf-core/gatk4/annotateintervals | Process | annotateintervals annotation bed gatk4 intervals | Annotates intervals with GC content, mappability, and segmental-duplication content |