Nextflow Modules
Showing module(s) with keyword "isomir"
| Module | Keywords | Description |
|---|---|---|
| nf-core/mirtop/counts | mirna isomir gff | mirtop counts generates a file with the minimal information about each sequence and the count data in columns for each samples. |
| nf-core/mirtop/export | mirna isomir gff | mirtop export generates files such as fasta, vcf or compatible with isomiRs bioconductor package |
| nf-core/mirtop/gff | mirna isomir gff | mirtop gff generates the GFF3 adapter format to capture miRNA variations |
| nf-core/mirtop/stats | mirna isomir gff | mirtop gff gets the number of isomiRs and miRNAs annotated in the GFF file by isomiR category. |