Nextflow Modules
Showing module(s) with keyword "metatranscriptomics"
| Module | Keywords | Description |
|---|---|---|
| nf-core/biomformat/convert | biom feature table formatting conversion amplicon sequences metagenomics metatranscriptomics | Convert biom table to different format. Conversion between text tab-delimited, BIOM-v1 (JSON), and BIOM-v2 (HDF5) formats are supported |
| nf-core/humann3/humann | function metagenomics metatranscriptomics profiling community | Functional analysis of metagenome or metatranscriptome data |
| nf-core/humann3/regroup | function metagenomics metatranscriptomics profiling community | Regrouping genes to other functional categories |
| nf-core/humann3/renorm | function metagenomics metatranscriptomics profiling community | Normalizing RPKs to relative abundance |