Nextflow Modules
Showing module(s) with keyword "mitochondrial"
| Module | Keywords | Description |
|---|---|---|
| nf-core/haplocheck | mitochondrial mtDNA contamination | Haplocheck detects contamination patterns in mtDNA AND WGS sequencing studies by analyzing the mitochondrial DNA. Haplocheck also works as a proxy tool for nDNA studies and provides users a graphical report to investigate the contamination further. Internally, it uses the Haplogrep tool, that supports rCRS and RSRS mitochondrial versions. |
| nf-core/mitorsaw/haplotype | heteroplasmy homoplasmy mitochondrial mitorsaw haplotype | Mitorsaw analyses mitochondrial variants and identifies heteroplasmy and homoplasmy |