Nextflow Modules
Showing module(s) with keyword "mkfastq"
| Module | Keywords | Description |
|---|---|---|
| nf-core/cellrangerarc/mkfastq | reference mkfastq fastq illumina bcl2fastq | Module to create fastqs needed by the 10x Genomics Cell Ranger Arc tool. Uses the cellranger-arc mkfastq command. |
| nf-core/cellrangeratac/mkfastq | reference mkfastq fastq illumina bcl2fastq | Module to create fastqs needed by the 10x Genomics Cell Ranger ATAC tool. Uses the cellranger-atac mkfastq command. |
| nf-core/cellranger/mkfastq | reference mkfastq fastq illumina bcl2fastq | Module to create FASTQs needed by the 10x Genomics Cell Ranger tool. Uses the cellranger mkfastq command. |