Nextflow Modules
Showing module(s) with keyword "popscle"
| Module | Keywords | Description |
|---|---|---|
| nf-core/popscle/demuxlet | popscle demultiplexing genotype-based deconvoltion single cell | Software to deconvolute sample identity and identify multiplets when multiple samples are pooled by barcoded single cell sequencing and external genotyping data for each sample is available. |
| nf-core/popscle/dscpileup | popscle demultiplexing genotype-based deconvoltion single cell pile up | Software to pileup reads and corresponding base quality for each overlapping SNPs and each barcode. |
| nf-core/popscle/freemuxlet | popscle demultiplexing genotype-based deconvoltion single cell | Software to deconvolute sample identity and identify multiplets when multiple samples are pooled by barcoded single cell sequencing and external genotyping data for each sample is not available. |