Nextflow Modules
Showing module(s) with keyword "purity"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/cnvkit/purity | Process | cnvkit purity ploidy cns genomics | estimates tumor purity and ploidy from a .cnr/.cns pair, using the same grid-search likelihood model as the somatic HMM methods. |
| nf-core/tinc | Process | genomics tumour contamination normal purity | TINC is a package to determine the contamination of tumour DNA in a matched normal sample. The approach uses evolutionary theory applied to read counts data from whole-genome sequencing assays. |