Nextflow Modules
Showing module(s) with keyword "pypgx"
| Module | Kind | Keywords | Description |
|---|---|---|---|
| nf-core/pypgx/computecontrolstatistics | Process | pypgx pharmacogenetics controlstatistics | Compute summary statistics for control gene from BAM files. |
| nf-core/pypgx/createinputvcf | Process | pypgx Pharmacogenetics variants | Call SNVs/indels from BAM files for all target genes. |
| nf-core/pypgx/preparedepthofcoverage | Process | Pharmacogenetics pypgx SV | Prepare a depth of coverage file for all target genes with SV from BAM files. |
| nf-core/pypgx/runngspipeline | Process | pypgx pharmacogenetics genotyping | PyPGx pharmacogenomics genotyping pipeline for NGS data. |