Nextflow Modules
Showing module(s) with keyword "transposons"
| Module | Keywords | Description |
|---|---|---|
| nf-core/gt/ltrharvest | genomics genome annotation repeat transposons retrotransposons | Predicts LTR retrotransposons using GenomeTools gt-ltrharvest utility |
| nf-core/irescue | scRNA-seq transposons repeats | Quantification of transposable elements expression in scRNA-seq |
| nf-core/ltrharvest | genomics genome annotation repeat transposons retrotransposons | Predicts LTR retrotransposons using the parallel version of GenomeTools gt-ltrharvest utility included in the EDTA toolchain |