Nextflow Pipelines
Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.
5 pipeline(s) matching "pathogen".
| Pipeline | Keywords | Description |
|---|---|---|
|
nf-core/dualrnaseq
1.0.0
|
dualrna-seq host-pathogen quantification readmapping +1 | |
|
nf-core/eager
2.5.3
|
adna ancient-dna-analysis ancientdna genome +3 | |
|
nf-core/pathogenepidemiology
0.0.0-8261242
|
n/a | |
|
nf-core/pathogensurveillance
1.1.0
|
biosurveillance pathogen-identification | |
|
nf-core/taxprofiler
2.0.1
|
classification illumina long-reads metagenomics +7 |