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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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3 pipeline(s) matching "quantification".

Pipeline Keywords Description
nf-core/dualrnaseq
1.0.0
dualrna-seq host-pathogen quantification readmapping +1 Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.
nf-core/metaboigniter
2.0.1
identification mass-spectrometry metabolomics ms1 +2 Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
nf-core/proteomicslfq
1.0.0
label-free-quantification openms proteomics Proteomics label-free quantification (LFQ) analysis pipeline