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Nextflow Pipelines

Nextflow pipelines hosted in Git repositories. Each published release records the Git revision it runs and the launch configuration it ships with.

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2 pipeline(s) matching "proteogenomics".

Pipeline Keywords Description
nf-core/proteogenomicsdb
1.0.0
cosmic gnomad protein-databases proteogenomics +2 The ProteoGenomics database generation workflow creates different protein databases for ProteoGenomics data analysis.
nf-core/quantms
1.2.0
dia lfq mass-spec mass-spectrometry +4 Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.