nf-core/deeptools/plotprofile @ 0.0.0-6c4ed3a
Summary
plots values produced by deeptools_computematrix as a profile plot
Get started
Add the following snippet to your workflow script to include this module.
include { DEEPTOOLS_PLOTPROFILE } from 'nf-core/deeptools/plotprofile'
License
MIT License
Process
Name
|
DEEPTOOLS_PLOTPROFILE |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test' ] |
|---|---|
matrix
file
|
gzipped matrix file produced by deeptools_ computematrix deeptools utility *.{mat.gz}
|
Output
3 channels
#1
pdf
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.pdf
file
|
Output figure containing resulting plot *.{plotProfile.pdf}
|
#2
table
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.tab
file
|
Output table *.tab
|
#3
versions_deeptools
tuple
${task.process}
string
|
The name of the process |
|---|---|
deeptools
string
|
The name of the tool |
plotProfile --version | sed "s/plotProfile //g"
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| deeptools | A set of user-friendly tools for normalization and visualization of deep-sequencing data | n/a |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:14:01 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fdeeptools%2Fplotprofile/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/deeptools/plotprofile/blobs/sha256:2ccb9ea7777a2ff1b219644a759ccf9ee1c555f21e050bb0d257c98b0aaf8f62 |
| Size | 2.4 KB |
| Checksum | sha256:2ccb9ea7777a2ff1b219644a759ccf9ee1c555f21e050bb0d257c98b0aaf8f62 |
| Downloads | 4 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:14:01 (UTC) | 4 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:10:12 (UTC) | 4 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:57:12 (UTC) | 3 | 2.4 KB |