Nextflow Modules
Showing module(s) with keyword "profile"
| Module | Keywords | Description |
|---|---|---|
| nf-core/deeptools/plotprofile | plot profile scores matrix | plots values produced by deeptools_computematrix as a profile plot |
| nf-core/expansionhunterdenovo/profile | expansionhunterdenovo profile STR genome bam cram | Compute genome-wide STR profile |
| nf-core/hmmer/hmmalign | alignment HMMER profile amino acid nucleotide | hmmalign from the HMMER suite aligns a number of sequences to an HMM profile |
| nf-core/instrain/profile | instrain metagenomics population genomics profile | inStrain is python program for analysis of co-occurring genome populations from metagenomes that allows highly accurate genome comparisons, analysis of coverage, microdiversity, and linkage, and sensitive SNP detection with gene localization and synonymous non-synonymous identification |
| nf-core/melon | profile metagenomics melon classification long reads nanopore | Performs taxonomic profiling of long metagenomic reads against the melon database |
| nf-core/sylph/profile | profile metagenomics sylph classification | Sylph profile command for taxonoming profiling |
| nf-core/sylph/sketchgenomes | profile metagenomics sylph classification genomes sketch | Sylph profile command for taxonoming profiling of genomes |