nf-core/diamond/cluster @ 0.0.0-3fc6d40
Summary
calculate clusters of highly similar sequences
Get started
Add the following snippet to your workflow script to include this module.
include { DIAMOND_CLUSTER } from 'nf-core/diamond/cluster'
License
MIT License
Process
Name
|
DIAMOND_CLUSTER |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
db
file
|
The input sequence database. Supported formats are FASTA and DIAMOND (.dmnd) format. *.{dmnd,fa,faa,fasta}(.gz)
|
Output
2 channels
#1
tsv
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.tsv
file
|
a 2-column tabular file with the representative accession as the first column and the member sequence accession as the second column *.tsv
|
#2
versions_diamond
tuple
${task.process}
string
|
The name of the process |
|---|---|
diamond
string
|
The name of the tool |
diamond --version | sed 's/diamond version //g'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| diamond | Accelerated BLAST compatible local sequence aligner | https://github.com/bbuchfink/diamond/wiki |
| Version | 0.0.0-3fc6d40 |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 22 Apr 2026 15:10:19 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fdiamond%2Fcluster/0.0.0-3fc6d40/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/diamond/cluster/blobs/sha256:205a0f7968e01e41fe1734836dc2dfd3acedebcc2923f96f5a81c0fb9794dadf |
| Size | 2.4 KB |
| Checksum | sha256:205a0f7968e01e41fe1734836dc2dfd3acedebcc2923f96f5a81c0fb9794dadf |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:14:08 (UTC) | 3 | 2.4 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:10:19 (UTC) | 3 | 2.4 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 18:57:34 (UTC) | 3 | 2.4 KB |