Nextflow Registry | nf-core/famsa/guidetree@0.0.0-0c7146d

nf-core/famsa/guidetree @ 0.0.0-0c7146d

Renders a guidetree in famsa

guide tree msa newick

Latest version: 0.0.0-6c4ed3a

Total downloads: 10

Source: nf-core/modules

Authors: @luisas @JoseEspinosa

Maintainers: @luisas @JoseEspinosa

Renders a guidetree in famsa

Add the following snippet to your workflow script to include this module.

include { FAMSA_GUIDETREE } from 'nf-core/famsa/guidetree'

MIT License

Process

`Name`	`FAMSA_GUIDETREE`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test']`
`fasta` file	Input sequences in FASTA format `*.{fa,fasta}`

Output 2 channels

#1 tree tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test']`
`*.dnd` file	Guide tree file in Newick format `*.{dnd}`

#2 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
famsa	Algorithm for large-scale multiple sequence alignments	https://github.com/refresh-bio/FAMSA

Version	0.0.0-0c7146d
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	08 Apr 2026 18:59:09 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Ffamsa%2Fguidetree/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/famsa/guidetree/blobs/sha256:01760949fb0dc50b23d0f778bd39f4a3a27bfddc36528c66d6a757706478e1f6
Size	2.0 KB
Checksum	sha256:01760949fb0dc50b23d0f778bd39f4a3a27bfddc36528c66d6a757706478e1f6
Downloads	4

Version	Date	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:15:19 (UTC)	3	2.1 KB
0.0.0-3fc6d40	22 Apr 2026 15:11:13 (UTC)	3	2.1 KB
0.0.0-0c7146d	08 Apr 2026 18:59:09 (UTC)	4	2.0 KB