Nextflow Modules
Showing module(s) with keyword "newick"
| Module | Keywords | Description |
|---|---|---|
| nf-core/clustalo/guidetree | guide tree msa newick | Renders a guidetree in clustalo |
| nf-core/famsa/guidetree | guide tree msa newick | Renders a guidetree in famsa |
| nf-core/fastme | phylogenetics newick minimum_evolution distance-based | Distance-based phylogeny with FastME |
| nf-core/fasttree | phylogeny newick alignment | Produces a Newick format phylogeny from a multiple sequence alignment. Capable of bacterial genome size alignments. |
| nf-core/iqtree | phylogeny newick maximum likelihood | Produces a Newick format phylogeny from a multiple sequence alignment using the maximum likelihood algorithm. Capable of bacterial genome size alignments. |
| nf-core/rapidnj | phylogeny newick neighbour-joining | Produces a Newick format phylogeny from a multiple sequence alignment using a Neighbour-Joining algorithm. Capable of bacterial genome size alignments. |
| nf-core/raxmlng | phylogeny newick maximum likelihood | RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. |