Nextflow Modules
Showing module(s) with keyword "msa"
| Module | Keywords | Description |
|---|---|---|
| nf-core/clustalo/guidetree | guide tree msa newick | Renders a guidetree in clustalo |
| nf-core/famsa/guidetree | guide tree msa newick | Renders a guidetree in famsa |
| nf-core/mafft/align | fasta msa multiple sequence alignment | Multiple sequence alignment using MAFFT |
| nf-core/mafft/guidetree | fasta msa guide tree | Guide tree rendering using MAFFT |
| nf-core/muscle | msa multiple sequence alignment phylogeny | MUSCLE is a program for creating multiple alignments of amino acid or nucleotide sequences. A range of options are provided that give you the choice of optimizing accuracy, speed, or some compromise between the two |
| nf-core/muscle5/super5 | align msa multiple sequence alignment | Muscle is a program for creating multiple alignments of amino acid or nucleotide sequences. This particular module uses the super5 algorithm for very big alignments. It can permutate the guide tree according to a set of flags. |