nf-core/ffq @ 0.0.0-6c4ed3a
Summary
A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA.
Get started
Add the following snippet to your workflow script to include this module.
include { FFQ } from 'nf-core/ffq'
License
MIT License
Process
Name
|
FFQ |
|---|
Input
1 channel
ids
list
|
List of supported database ids e.g. SRA / GEO / ENA |
|---|
Output
2 channels
#1
json
*.json
file
|
JSON file containing metadata for ids *.{json}
|
|---|
#2
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| ffq | A command line tool that makes it easier to find sequencing data from the SRA / GEO / ENA. | https://github.com/pachterlab/ffq |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:17:09 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fffq/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/ffq/blobs/sha256:9e82b24fb843e87cc3d710c24db8d433cc94cefc775abb5a7a0d90385a8de815 |
| Size | 2.0 KB |
| Checksum | sha256:9e82b24fb843e87cc3d710c24db8d433cc94cefc775abb5a7a0d90385a8de815 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:17:09 (UTC) | 3 | 2.0 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:12:09 (UTC) | 1 | 2.0 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:00:49 (UTC) | 3 | 2.0 KB |