nf-core/gt/gff3validator @ 0.0.0-0c7146d
Summary
GenomeTools gt-gff3validator utility to strictly validate a GFF3 file
Get started
Add the following snippet to your workflow script to include this module.
include { GT_GFF3VALIDATOR } from 'nf-core/gt/gff3validator'
License
MIT License
Process
Name
|
GT_GFF3VALIDATOR |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
gff3
file
|
Input gff3 file *.{gff,gff3}
|
Output
3 channels
#1
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
#2
error_log
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.error.log
file
|
Log file for failed validation *.error.log
|
#3
success_log
tuple
meta
map
|
Groovy Map containing sample information e.g. |
|---|---|
*.success.log
file
|
Log file for successful validation *.success.log
|
| Tool | Description | Homepage |
|---|---|---|
| gt | The GenomeTools genome analysis system | https://genometools.org/index.html |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:07:11 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fgt%2Fgff3validator/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/gt/gff3validator/blobs/sha256:0d792a0899840d775bcc6e3a3c6036e85640293c9d9c0d15bad86c7de8488230 |
| Size | 2.6 KB |
| Checksum | sha256:0d792a0899840d775bcc6e3a3c6036e85640293c9d9c0d15bad86c7de8488230 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:23:02 (UTC) | 3 | 2.6 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:15:39 (UTC) | 3 | 2.7 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:07:11 (UTC) | 3 | 2.6 KB |