nf-core/krona/ktupdatetaxonomy @ 0.0.0-6c4ed3a
Summary
KronaTools Update Taxonomy downloads a taxonomy database
Get started
Add the following snippet to your workflow script to include this module.
include { KRONA_KTUPDATETAXONOMY } from 'nf-core/krona/ktupdatetaxonomy'
License
MIT License
Process
Name
|
KRONA_KTUPDATETAXONOMY |
|---|
Output
2 channels
#1
db
taxonomy/taxonomy.tab
file
|
A TAB separated file that contains a taxonomy database. *.{tab}
|
|---|
#2
versions_krona
tuple
${task.process}
string
|
The name of the process |
|---|---|
krona
string
|
The name of the tool |
ktImportTaxonomy | grep -Po '(?<=KronaTools )[0-9.]+'
eval
|
The expression to obtain the version of the tool |
| Tool | Description | Homepage |
|---|---|---|
| krona | Krona Tools is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files. | https://github.com/marbl/Krona/wiki/KronaTools |
| Version | 0.0.0-6c4ed3a |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 23 Apr 2026 15:27:28 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fkrona%2Fktupdatetaxonomy/0.0.0-6c4ed3a/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/krona/ktupdatetaxonomy/blobs/sha256:fa39be245ed1729709ec77f9b9b74f0401f2debbd2e8759900ab98d237a507be |
| Size | 2.1 KB |
| Checksum | sha256:fa39be245ed1729709ec77f9b9b74f0401f2debbd2e8759900ab98d237a507be |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:27:28 (UTC) | 3 | 2.1 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:13:37 (UTC) | 4 | 2.1 KB |