Nextflow Registry | nf-core/learnmsa/align@0.0.0-0c7146d

nf-core/learnmsa/align @ 0.0.0-0c7146d

Align sequences using learnMSA

alignment MSA genomics

Latest version: 0.0.0-3fc6d40

Total downloads: 7

Source: nf-core/modules

Authors: @luisas @JoseEspinosa

Maintainers: @luisas @JoseEspinosa

Align sequences using learnMSA

Add the following snippet to your workflow script to include this module.

include { LEARNMSA_ALIGN } from 'nf-core/learnmsa/align'

MIT License

Process

`Name`	`LEARNMSA_ALIGN`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test']`
`fasta` file	Input sequences in FASTA format. `*.{fa,fasta}`

Output 2 channels

#1 versions

`versions.yml` file	File containing software versions `versions.yml`

#2 alignment tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test']`
`*.aln` file	Alignment file, in FASTA format. `*.aln`

Tool	Description	Homepage
learnmsa	learnMSA: Learning and Aligning large Protein Families	https://github.com/Gaius-Augustus/learnMSA

Version	0.0.0-0c7146d
Commit ID	3fc6d40d163d89ae44d40a00b9017d5a9df5170e
Release Date	08 Apr 2026 19:13:54 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Flearnmsa%2Falign/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/learnmsa/align/blobs/sha256:b60b69800233751c66f6f5c8f361ad68e88fd070e1d108f6034efb8aeb7ecd13
Size	2.4 KB
Checksum	sha256:b60b69800233751c66f6f5c8f361ad68e88fd070e1d108f6034efb8aeb7ecd13
Downloads	3

Version	Date	Status	Downloads	Size
0.0.0-3fc6d40	22 Apr 2026 15:19:13 (UTC)		4	2.4 KB
0.0.0-0c7146d	08 Apr 2026 19:13:54 (UTC)		3	2.4 KB