nf-core/mash/sketch @ 0.0.0-0c7146d
Summary
Creates vastly reduced representations of sequences using MinHash
Get started
Add the following snippet to your workflow script to include this module.
include { MASH_SKETCH } from 'nf-core/mash/sketch'
License
MIT License
Process
Name
|
MASH_SKETCH |
|---|
Input
1 channel
#1
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
reads
file
|
List of input paired-end FastQ files |
Output
3 channels
#1
mash
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.msh
file
|
Sketch output *.{mash}
|
#2
stats
tuple
meta
map
|
Groovy Map containing sample information e.g. [ id:'test', single_end:false ] |
|---|---|
*.mash_stats
file
|
Sketch statistics *.{mash_stats}
|
#3
versions
versions.yml
file
|
File containing software versions versions.yml
|
|---|
| Tool | Description | Homepage |
|---|---|---|
| mash | Fast sequence distance estimator that uses MinHash | https://github.com/marbl/Mash |
| Version | 0.0.0-0c7146d |
|---|---|
| Commit ID | 6c4ed3a220310b905a1fc9d04f05be2e0837142b |
| Release Date | 08 Apr 2026 19:16:17 (UTC) |
| Download URL | https://registry.nextflow.io/api/v1/modules/nf-core%2Fmash%2Fsketch/0.0.0-0c7146d/download |
| OCI Store URL | https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/mash/sketch/blobs/sha256:816826f6c45e188a0c1b0eb42c70fc640f70fa02cda5f66ca47356d8ba808756 |
| Size | 2.3 KB |
| Checksum | sha256:816826f6c45e188a0c1b0eb42c70fc640f70fa02cda5f66ca47356d8ba808756 |
| Downloads | 3 |
| Version | Date | Status | Downloads | Size |
|---|---|---|---|---|
| 0.0.0-6c4ed3a | 23 Apr 2026 15:29:34 (UTC) | 3 | 2.3 KB | |
| 0.0.0-3fc6d40 | 22 Apr 2026 15:21:01 (UTC) | 3 | 2.3 KB | |
| 0.0.0-0c7146d | 08 Apr 2026 19:16:17 (UTC) | 3 | 2.3 KB |