Nextflow Registry | Nextflow Modules

Nextflow Modules

Showing module(s) with keyword "sketch"

Module	Keywords	Description
nf-core/bbmap/sendsketch	taxonomy classification sketch query fastq fasta	Compares query sketches to reference sketches hosted on a remote server via the Internet.
nf-core/fairy/sketch	sketch coverage fastq alignment-free metagenomics	Sketches FASTQ reads into binary sketch (.bcsp) files for alignment-free coverage estimation.
nf-core/mash/sketch	mash mash/sketch minhash reduced representations sequences sketch	Creates vastly reduced representations of sequences using MinHash
nf-core/ska/fasta	genomics metagenomics kmer split_kmers sketch	Create genome sketch using split k-mers
nf-core/skani/dist	skani metagenomics genome alignment sketch distance dist	Simple ANI calculation between reference and query genomes.
nf-core/skani/sketch	skani metagenomics genome alignment sketch	Storing skani sketches/indices on disk.
nf-core/skani/triangle	skani metagenomics genome alignment sketch distance dist	All-to-all ANI computation.
nf-core/sylph/sketch	sketch metagenomics sylph indexing	Sketching/indexing sequencing reads
nf-core/sylph/sketchgenomes	profile metagenomics sylph classification genomes sketch	Sylph profile command for taxonoming profiling of genomes
nf-core/sylph/sketchsamples	sketch metagenomics sylph samples indexing	Sketching/indexing sequencing reads