Nextflow Registry | nf-core/mirtop/stats@0.0.0-0c7146d

nf-core/mirtop/stats @ 0.0.0-0c7146d

mirtop gff gets the number of isomiRs and miRNAs annotated in the GFF file by isomiR category.

mirna isomir gff

Latest version: 0.0.0-6c4ed3a

Total downloads: 6

Source: nf-core/modules

Authors: @atrigila

Maintainers: @atrigila @lpantano

mirtop gff gets the number of isomiRs and miRNAs annotated in the GFF file by isomiR category.

Add the following snippet to your workflow script to include this module.

include { MIRTOP_STATS } from 'nf-core/mirtop/stats'

MIT License

Process

`Name`	`MIRTOP_STATS`

Input 1 channel

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1', single_end:false ]`
`mirtop_gff` file	Mirtop GFF file obtained with mirtop_gff `*.{gff}`

Output 3 channels

#1 log tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1', single_end:false ]`
`stats/*_stats.log` file	log file with stats `*.{log}`

#2 txt tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'sample1', single_end:false ]`
`stats/*_stats.txt` file	TXT file with stats `*.{txt}`

#3 versions

`versions.yml` file	File containing software versions `versions.yml`

Tool	Description	Homepage
mirtop	Small RNA-seq annotation	https://github.com/miRTop/mirtop

Version	0.0.0-0c7146d
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	08 Apr 2026 19:18:20 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Fmirtop%2Fstats/0.0.0-0c7146d/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/mirtop/stats/blobs/sha256:9628a1e20e66671d529de3656aa066089fd55e6f33918e2f60a0a6233b8e18c2
Size	2.4 KB
Checksum	sha256:9628a1e20e66671d529de3656aa066089fd55e6f33918e2f60a0a6233b8e18c2
Downloads	3

Version	Date	Status	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:30:54 (UTC)		3	2.4 KB
0.0.0-0c7146d	08 Apr 2026 19:18:20 (UTC)		3	2.4 KB