Nextflow Registry | nf-core/mmseqs/createtsv@0.0.0-6c4ed3a

nf-core/mmseqs/createtsv @ 0.0.0-6c4ed3a

Create a tsv file from a query and a target database as well as the result database

Latest version: 0.0.0-6c4ed3a

Total downloads: 3

Source: nf-core/modules

Authors: @Joon-Klaps

Maintainers: @Joon-Klaps

Create a tsv file from a query and a target database as well as the result database

Add the following snippet to your workflow script to include this module.

include { MMSEQS_CREATETSV } from 'nf-core/mmseqs/createtsv'

MIT License

Process

`Name`	`MMSEQS_CREATETSV`

Input 3 channels

#1 tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`db_result` directory	an MMseqs2 database with result data

#2 tuple

`meta2` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`db_query` directory	an MMseqs2 database with query data

#3 tuple

`meta3` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`db_target` directory	an MMseqs2 database with target data

Output 2 channels

#1 tsv tuple

`meta` map	Groovy Map containing sample information e.g. `[ id:'test', single_end:false ]`
`*.tsv` file	The resulting tsv file created using the query, target and result MMseqs databases `*.{tsv}`

#2 versions_mmseqs tuple

`${task.process}` string	The name of the process
`mmseqs` string	The name of the tool
`mmseqs version` eval	The expression to obtain the version of the tool

Tool	Description	Homepage
mmseqs	MMseqs2: ultra fast and sensitive sequence search and clustering suite	https://github.com/soedinglab/MMseqs2

Version	0.0.0-6c4ed3a
Commit ID	6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date	23 Apr 2026 15:31:03 (UTC)
Download URL	https://registry.nextflow.io/api/v1/modules/nf-core%2Fmmseqs%2Fcreatetsv/0.0.0-6c4ed3a/download
OCI Store URL	https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/mmseqs/createtsv/blobs/sha256:4b1e981993b4810cc94a49241ef227d7f0bd6c3f9916bbf243360cd043ac538a
Size	3.2 KB
Checksum	sha256:4b1e981993b4810cc94a49241ef227d7f0bd6c3f9916bbf243360cd043ac538a
Downloads	2

Version	Date	Status	Downloads	Size
0.0.0-6c4ed3a	23 Apr 2026 15:31:03 (UTC)		2	3.2 KB
0.0.0-0c7146d	08 Apr 2026 19:18:38 (UTC)		1	3.2 KB