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nf-core/openms/idmerger @ 0.0.0-0c7146d

Merges several idXML files into one idXML file.

Latest version: 0.0.0-6c4ed3a
Total downloads: 9
Source: nf-core/modules
Authors: @jonasscheid

Summary

Merges several idXML files into one idXML file.

Get started

Add the following snippet to your workflow script to include this module.

include { OPENMS_IDMERGER } from 'nf-core/openms/idmerger'

License

MIT License

Process
Name OPENMS_IDMERGER
Input 1 channel
#1 tuple
meta map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

idxmls file

List containing 2 or more idXML files e.g. [ 'file1.idXML', 'file2.idXML' ]

*.{idXML}
Output 2 channels
#1 idxml tuple
meta map

Groovy Map containing sample information e.g. [ id:'test', single_end:false ]

*.idXML file

Merged idXML output file

*.{idXML}
#2 versions_openms tuple
${task.process} string

The name of the process

openms string

The name of the tool

FileInfo --help 2>&1 | sed -nE 's/^Version: ([0-9.]+).*/\1/p' eval

The expression to obtain the version of the tool

Tool Description Homepage
openms OpenMS is an open-source software C++ library for LC-MS data management and analyses https://openms.de
Version 0.0.0-0c7146d
Commit ID 6c4ed3a220310b905a1fc9d04f05be2e0837142b
Release Date 08 Apr 2026 19:22:14 (UTC)
Download URL https://registry.nextflow.io/api/v1/modules/nf-core%2Fopenms%2Fidmerger/0.0.0-0c7146d/download
OCI Store URL https://public.cr.seqera.io/v2/nextflow/plugin/modules/nf-core/openms/idmerger/blobs/sha256:c1d1e06376168bef83ce881ce6dbf8fdc69a461b3e9c4f1568e0df21f052b91d
Size 2.4 KB
Checksum sha256:c1d1e06376168bef83ce881ce6dbf8fdc69a461b3e9c4f1568e0df21f052b91d
Downloads 3
Version Date Status Downloads Size
0.0.0-6c4ed3a 23 Apr 2026 15:33:43 (UTC) 2 2.4 KB
0.0.0-3fc6d40 22 Apr 2026 15:24:06 (UTC) 4 2.4 KB
0.0.0-0c7146d 08 Apr 2026 19:22:14 (UTC) 3 2.4 KB